{ "cells": [ { "cell_type": "markdown", "metadata": {}, "source": [ "Use Voting Classifiers\n", "======================\n", "\n", "A [Voting classifier](http://scikit-learn.org/stable/modules/ensemble.html#voting-classifier) model combines multiple different models (i.e., sub-estimators) into a single model, which is (ideally) stronger than any of the individual models alone. \n", "\n", "[Dask](http://ml.dask.org/joblib.html) provides the software to train individual sub-estimators on different machines in a cluster. This enables users to train more models in parallel than would have been possible on a single machine. Note that users will only observe this benefit if they have a distributed cluster with more resources than their single machine (because sklearn already enables users to parallelize training across cores on a single machine).\n", "\n", "What follows is an example of how one would deploy a voting classifier model in dask (using a local cluster).\n", "\n", "\"Dask" ] }, { "cell_type": "code", "execution_count": 1, "metadata": { "execution": { "iopub.execute_input": "2021-10-14T16:51:21.275281Z", "iopub.status.busy": "2021-10-14T16:51:21.274569Z", "iopub.status.idle": "2021-10-14T16:51:21.989560Z", "shell.execute_reply": "2021-10-14T16:51:21.990352Z" } }, "outputs": [], "source": [ "from sklearn.ensemble import VotingClassifier\n", "from sklearn.linear_model import SGDClassifier\n", "from sklearn.linear_model import LogisticRegression\n", "from sklearn.svm import SVC\n", "\n", "import sklearn.datasets" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "We create a synthetic dataset (with 1000 rows and 20 columns) that we can give to the voting classifier model." ] }, { "cell_type": "code", "execution_count": 2, "metadata": { "execution": { "iopub.execute_input": "2021-10-14T16:51:21.994179Z", "iopub.status.busy": "2021-10-14T16:51:21.992935Z", "iopub.status.idle": "2021-10-14T16:51:22.000253Z", "shell.execute_reply": "2021-10-14T16:51:22.001044Z" } }, "outputs": [], "source": [ "X, y = sklearn.datasets.make_classification(n_samples=1_000, n_features=20)" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "We specify the VotingClassifier as a list of (name, sub-estimator) tuples. Fitting the VotingClassifier on the data fits each of the sub-estimators in turn. We set the ```n_jobs``` argument to be -1, which instructs sklearn to use all available cores (notice that we haven't used dask)." ] }, { "cell_type": "code", "execution_count": 3, "metadata": { "execution": { "iopub.execute_input": "2021-10-14T16:51:22.004418Z", "iopub.status.busy": "2021-10-14T16:51:22.003137Z", "iopub.status.idle": "2021-10-14T16:51:22.008196Z", "shell.execute_reply": "2021-10-14T16:51:22.008872Z" } }, "outputs": [], "source": [ "classifiers = [\n", " ('sgd', SGDClassifier(max_iter=1000)),\n", " ('logisticregression', LogisticRegression()),\n", " ('svc', SVC(gamma='auto')),\n", "]\n", "clf = VotingClassifier(classifiers, n_jobs=-1)" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "We call the classifier's fit method in order to train the classifier." ] }, { "cell_type": "code", "execution_count": 4, "metadata": { "execution": { "iopub.execute_input": "2021-10-14T16:51:22.011813Z", "iopub.status.busy": "2021-10-14T16:51:22.010818Z", "iopub.status.idle": "2021-10-14T16:51:23.324750Z", "shell.execute_reply": "2021-10-14T16:51:23.325487Z" } }, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ "CPU times: user 16.1 ms, sys: 20.1 ms, total: 36.2 ms\n", "Wall time: 1.28 s\n" ] }, { "data": { "text/plain": [ "VotingClassifier(estimators=[('sgd', SGDClassifier()),\n", " ('logisticregression', LogisticRegression()),\n", " ('svc', SVC(gamma='auto'))],\n", " n_jobs=-1)" ] }, "execution_count": 4, "metadata": {}, "output_type": "execute_result" } ], "source": [ "%time clf.fit(X, y)" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "Creating a Dask [client](https://distributed.readthedocs.io/en/latest/client.html) provides performance and progress metrics via the dashboard. Because ```Client``` is given no arugments, its output refers to a [local cluster](http://distributed.readthedocs.io/en/latest/local-cluster.html) (not a distributed cluster).\n", "\n", "We can view the dashboard by clicking the link after running the cell." ] }, { "cell_type": "code", "execution_count": 5, "metadata": { "execution": { "iopub.execute_input": "2021-10-14T16:51:23.329326Z", "iopub.status.busy": "2021-10-14T16:51:23.328140Z", "iopub.status.idle": "2021-10-14T16:51:25.274502Z", "shell.execute_reply": "2021-10-14T16:51:25.275443Z" } }, "outputs": [ { "name": "stderr", "output_type": "stream", "text": [ "/usr/share/miniconda3/envs/dask-examples/lib/python3.8/site-packages/distributed/node.py:151: UserWarning: Port 8787 is already in use.\n", "Perhaps you already have a cluster running?\n", "Hosting the HTTP server on port 34895 instead\n", " warnings.warn(\n" ] }, { "data": { "text/html": [ "\n", "\n", "\n", "\n", "\n", "
\n", "

Client

\n", "\n", "		\n", "

Cluster

\n", "
    \n", "
  • Workers: 2
    • \n", "
  • Cores: 2
    • \n", "
  • Memory: 7.29 GB
    • \n", "
\n", "
" ], "text/plain": [ "" ] }, "execution_count": 5, "metadata": {}, "output_type": "execute_result" } ], "source": [ "import joblib\n", "from distributed import Client\n", "\n", "client = Client()\n", "client" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "To train the voting classifier, we call the classifier's fit method, but enclosed in joblib's ```parallel_backend``` context manager. This distributes training of sub-estimators acoss the cluster." ] }, { "cell_type": "code", "execution_count": 6, "metadata": { "execution": { "iopub.execute_input": "2021-10-14T16:51:25.282669Z", "iopub.status.busy": "2021-10-14T16:51:25.281925Z", "iopub.status.idle": "2021-10-14T16:51:26.740861Z", "shell.execute_reply": "2021-10-14T16:51:26.741645Z" } }, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ "VotingClassifier(estimators=[('sgd', SGDClassifier()),\n", " ('logisticregression', LogisticRegression()),\n", " ('svc', SVC(gamma='auto'))],\n", " n_jobs=-1)\n", "CPU times: user 86 ms, sys: 16.2 ms, total: 102 ms\n", "Wall time: 1.45 s\n" ] } ], "source": [ "%%time \n", "with joblib.parallel_backend(\"dask\"):\n", " clf.fit(X, y)\n", "\n", "print(clf)" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "Note, that we see no advantage of using dask because we are using a local cluster rather than a distributed cluster and sklearn is already using all my computer's cores. If we were using a distributed cluster, dask would enable us to take advantage of the multiple machines and train sub-estimators across them." ] } ], "metadata": { "kernelspec": { "display_name": "Python 3", "language": "python", "name": "python3" }, "language_info": { "codemirror_mode": { "name": "ipython", "version": 3 }, "file_extension": ".py", "mimetype": "text/x-python", "name": "python", "nbconvert_exporter": "python", "pygments_lexer": "ipython3", "version": "3.8.12" } }, "nbformat": 4, "nbformat_minor": 2 }